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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs6427213 chr1:169713146 A/G F5 chr1:169483404-169555826:- 0.77 5.37 1.89E-6 Box Plot
ACC rs6429386 chr1:235333550 T/C RBM34 chr1:235294498-235324772:- 0.74 6.07 1.48E-7 Box Plot
ACC rs6442008 chr3:46645753 C/T TDGF1 chr3:46616024-46623953:+ 0.75 7.5 7.95E-10 Box Plot
ACC rs644341 chr1:245159822 A/T EFCAB2 chr1:245133007-245290466:+ 0.59 5.45 1.41E-6 Box Plot
ACC rs6454471 chr6:86214456 T/G SNHG5 chr6:86370668-86388454:- 0.68 5.16 3.87E-6 Box Plot
ACC rs6454472 chr6:86224053 T/G SNHG5 chr6:86370668-86388454:- 0.74 8.42 2.76E-11 Box Plot
ACC rs6454473 chr6:86245215 C/T SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs6454481 chr6:86409998 T/C SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs6460247 chr7:64891534 C/T INTS4L1 chr7:64601603-64694600:+ 0.75 5.36 1.93E-6 Box Plot
ACC rs6465121 chr7:76036380 G/C UPK3B chr7:76139745-76145838:+ 0.7 5.31 2.28E-6 Box Plot
ACC rs6465128 chr7:76058767 G/T UPK3B chr7:76139745-76145838:+ 0.77 7.14 2.91E-9 Box Plot
ACC rs6472538 chr8:71586971 A/G XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs6472539 chr8:71629810 G/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs6472543 chr8:71664408 A/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs6472551 chr8:71781849 C/T XKR9 chr8:71581600-71702606:+ 0.66 6.7 1.51E-8 Box Plot